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BDP TMR NHS ester | CAS 485397-12-4
| Catalog Number | R01-0011 |
| Category | BODIPY |
| Molecular Formula | C25H24BF2N3O5 |
| Molecular Weight | 495.28 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
BDP TMR is a borondipyrromethene dye, analog of BODIPY® TMR. This is an amine-reactive NHS ester for the labeling of proteins, peptides, and other molecules with amino groups.BDP TMR is a dye for TAMRA channel, which is however much brighter than TAMRA. Because of rather long life time of excited state, this fluorophore is a good choice for fluorescence anisotropy measurements, especially with the short linker offered. Fluorescence polarization is an excellent method for high throughput binding assays.
Chemical Information
Product Specification
Computed Properties
| Synonyms | BODIPY TMR NHS Ester; (2,5-dioxopyrrolidin-1-yl) 3-[2,2-difluoro-12-(4-methoxyphenyl)-4,6-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-5-yl]propanoate |
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | (2,5-dioxopyrrolidin-1-yl) 3-[2,2-difluoro-12-(4-methoxyphenyl)-4,6-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-5-yl]propanoate |
| Canonical SMILES | [B-]1(N2C(=CC=C2C3=CC=C(C=C3)OC)C=C4[N+]1=C(C(=C4C)CCC(=O)ON5C(=O)CCC5=O)C)(F)F |
| InChI | InChI=1S/C25H24BF2N3O5/c1-15-20(9-13-25(34)36-31-23(32)11-12-24(31)33)16(2)29-22(15)14-18-6-10-21(30(18)26(29,27)28)17-4-7-19(35-3)8-5-17/h4-8,10,14H,9,11-13H2,1-3H3 |
| InChIKey | XMAZILQWJQABLQ-UHFFFAOYSA-N |
| Solubility | good in most organic solvents (DMF, DMSO, DCM, acetone, etc.) |
| Appearance | purple solid |
| Fluorescence Quantum Yield | 0.95 |
| Excitation | 545 |
| Emission | 570 |
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 8 |
| Rotatable Bond Count | 7 |
| Exact Mass | 495.1777074 g/mol |
| Monoisotopic Mass | 495.1777074 g/mol |
| Topological Polar Surface Area | 80.8Ų |
| Heavy Atom Count | 36 |
| Formal Charge | 0 |
| Complexity | 1060 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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