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BDP 650/665 DBCO
| Catalog Number | F01-0252 |
| Category | BODIPY |
| Molecular Formula | C44H38N5BF2O3 |
| Molecular Weight | 733.61 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
BDP 650/665 is a bright far-red-fluorescent dye that is similar to BODIPY™ 650/665 and Cy™5 by its spectral characteristics. This high quantum yield dye is relatively non-sensitive to solvent polarity and pH changes.,Due to its significant hydrophobic properties, BDP 650/665 can be used for staining membranes, lipids, and other lipophilic compounds.,DBCO, a substituting group introduced in this molecule, is a dibenzocyclooctyne that is commonly used in copper-free Click Chemistry reactions. BDP 650/665 DBCO can react with various functionalized azides (rapidly and without specialized Cu(I) catalysts) resulting in stable dye-biomolecule conjugates.
Chemical Information
Product Specification
Computed Properties
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | N-[6-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-6-oxohexyl]-2-[4-[(E)-2-[2,2-difluoro-12-(1H-pyrrol-2-yl)-3-aza-1-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl]ethenyl]phenoxy]acetamide |
| Canonical SMILES | [B-]1(N2C(=CC=C2C=CC3=CC=C(C=C3)OCC(=O)NCCCCCC(=O)N4CC5=CC=CC=C5C#CC6=CC=CC=C64)C=C7[N+]1=C(C=C7)C8=CC=CN8)(F)F |
| InChI | InChI=1S/C44H38BF2N5O3/c46-45(47)51-36(21-22-37(51)29-38-23-26-42(52(38)45)40-12-8-28-48-40)20-15-32-16-24-39(25-17-32)55-31-43(53)49-27-7-1-2-14-44(54)50-30-35-11-4-3-9-33(35)18-19-34-10-5-6-13-41(34)50/h3-6,8-13,15-17,20-26,28-29,48H,1-2,7,14,27,30-31H2,(H,49,53)/b20-15+ |
| InChIKey | SMLANKIREOERQG-HMMYKYKNSA-N |
| Solubility | Good in DMF, DMSO, dichloromethane |
| Appearance | Dark blue crystals |
| CF260 | 0.04 |
| CF280 | 0.04 |
| Fluorescence Quantum Yield | 0.52 |
| Excitation | 649 |
| Emission | 667 |
| Storage | Storage: 24 months after receival at -20 °C in the Dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 6 |
| Rotatable Bond Count | 12 |
| Exact Mass | 733.3035766 g/mol |
| Monoisotopic Mass | 733.3035766 g/mol |
| Topological Polar Surface Area | 82.4Ų |
| Heavy Atom Count | 55 |
| Formal Charge | 0 |
| Complexity | 1610 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 1 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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