BDP 558/568 azide

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BDP 558/568 azide

BDP 558/568 azide

Catalog Number F01-0002
Category BODIPY
Molecular Formula C19H19N6BF2OS
Molecular Weight 428.27
Catalog Number Size Price Quantity
F01-0002 -- $--

Product Introduction

BDP 558/568 azide is a borondipyrromethene dye with azide functional group for Click chemistry. Its spectra are close to Cyanine3 channel. The fluorophore has been used for lipid tracking as BDP 558/568 C12, but azide functional groups allow easy conjugation with a wide variety of other molecules of interest.

Chemical Information

Synonyms Bodipy 558/568 azide
Purity NMR 1H, HPLC-MS (95%)
IUPAC Name N-(3-azidopropyl)-3-(2,2-difluoro-12-thiophen-2-yl-3-aza-1-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl)propanamide
Canonical SMILES [B-]1(N2C(=CC=C2CCC(=O)NCCCN=[N+]=[N-])C=C3[N+]1=C(C=C3)C4=CC=CS4)(F)F
InChI InChI=1S/C19H19BF2N6OS/c21-20(22)27-14(7-9-19(29)24-10-2-11-25-26-23)4-5-15(27)13-16-6-8-17(28(16)20)18-3-1-12-30-18/h1,3-6,8,12-13H,2,7,9-11H2,(H,24,29)
InChI Key ZPOKKCUBLPETSH-UHFFFAOYSA-N
Solubility soluble in many organic solvents (DCM, acetone, alcohols, DMF, DMSO), low solubility in water
Appearance dark colored solid
  • Product Specification
ε, L⋅mol-1⋅cm-1 84400
Excitation 561
Emission 569
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 7
Rotatable Bond Count 8
Exact Mass 428.1402169 g/mol
Monoisotopic Mass 428.1402169 g/mol
Topological Polar Surface Area 79.6Ų
Heavy Atom Count 30
Formal Charge 0
Complexity 841
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes
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