
1,1,1-Trifluoroethyl-PEG2-azide | CAS 1835759-68-6
| Catalog Number | R14-0136 |
| Category | Azides |
| Molecular Formula | C6H10F3N3O2 |
| Molecular Weight | 213.16 |
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Product Introduction
1,1,1-Trifluoroethyl-PEG2-azide is a crosslinker containing an azide group and a trifluroethyl group. The azide group can participate in Click Chemistry reactions with reagents such as alkynes, DBCO and BCN. The hydrophilic PEG spacer increases solubility in aqueous media. The trifluoroethyl group is used to react with lysine and other primary amine groups in proteins, antibodies, and other molecules and surfaces.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Synonyms | Ethane, 2-[2-(2-azidoethoxy)ethoxy]-1,1,1-trifluoro-; Ethane, 1-(2-azidoethoxy)-2-(2,2,2-trifluoroethoxy)-; HUN59686; HUN-59686; HUN 59686 |
| Purity | ≥95% |
| IUPAC Name | 2-[2-(2-azidoethoxy)ethoxy]-1,1,1-trifluoroethane |
| SMILES | C(COCCOCC(F)(F)F)N=[N+]=[N-] |
| InChI | InChI=1S/C6H10F3N3O2/c7-6(8,9)5-14-4-3-13-2-1-11-12-10/h1-5H2 |
| InChIKey | HSRLFQUDMWNYCB-UHFFFAOYSA-N |
| Solubility | Soluble in DMSO |
| Appearance | Pale Yellow Oily Matter |
Product Specification
| Storage | Store at 2-8°C for short term (days to weeks) or -20°C for long term (months to years) |
Application
1,1,1-Trifluoroethyl-PEG2-azide is a PEG-based azide click chemistry reagent bearing a 1,1,1-trifluoroethyl substituent, enabling bioorthogonal conjugation via azide–alkyne cycloaddition. Its compact PEG spacer supports aqueous handling and minimizes steric interference, while the trifluoroethyl group provides a chemically distinct handle for downstream characterization and labeling workflows. This reagent is commonly selected for building modular PEGylated conjugates used in chemical biology, probe development, and materials functionalization where controlled attachment of biomolecular or surface-bound components is required.
1. PEGylated Probe Labeling
1,1,1-Trifluoroethyl-PEG2-azide is frequently used to install PEG spacers onto small-molecule, peptide, or polymeric probes prior to conjugation to alkyne-bearing partners. The PEG2 length helps improve solubility and reduces nonspecific interactions during probe handling and assay development, while the azide functionality provides a reliable click handle for attaching fluorophores, affinity tags, or reporter motifs. Researchers often incorporate this reagent into workflows that require consistent conjugation chemistry across multiple probe variants, including structure–property studies where the PEG spacer length and chemical identity of the attached group must be maintained.
2. Surface and Material Functionalization
1,1,1-Trifluoroethyl-PEG2-azide is well suited for functionalizing surfaces and biomaterials that present alkyne groups or can be patterned with alkyne handles for subsequent click coupling. In materials science and chemical biology, PEGylated azides are used to tune surface hydration, reduce fouling, and create defined attachment points for downstream ligands, imaging moieties, or capture reagents. The presence of the trifluoroethyl substituent can also assist with analytical tracking of surface modification and batch-to-batch consistency when characterizing functional group incorporation by spectroscopy or mass-based methods.
3. Molecular Imaging Reagent Building
1,1,1-Trifluoroethyl-PEG2-azide supports the modular construction of imaging and detection reagents that rely on azide–alkyne click conjugation to assemble complex probe architectures. Chemical biology teams use PEG2 spacers to manage probe size and accessibility of targeting or recognition elements introduced through alkyne-bearing intermediates. The reagent’s defined azide chemistry enables rapid interchange of reporter components, facilitating libraries of imaging constructs for method development, imaging chemistry optimization, and comparative studies of labeling strategies.
4. Diagnostic and Assay Conjugates
1,1,1-Trifluoroethyl-PEG2-azide is commonly incorporated into assay reagent development where PEG-mediated conjugation improves reagent stability and handling in aqueous assay buffers. By providing an azide handle for click attachment to alkyne-functional capture molecules or labeling reagents, this reagent helps generate consistent conjugate formats used in research diagnostics, molecular detection platforms, and workflow optimization for reagent assembly. The trifluoroethyl-bearing PEG construct is often selected when robust analytical confirmation of conjugation identity is important during method transfer and reagent qualification within laboratory pipelines.
Computed Properties
| XLogP3 | 1.9 |
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 7 |
| Rotatable Bond Count | 7 |
| Exact Mass | 213.07251106 g/mol |
| Monoisotopic Mass | 213.07251106 g/mol |
| Topological Polar Surface Area | 32.8Ų |
| Heavy Atom Count | 14 |
| Formal Charge | 0 |
| Complexity | 191 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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