6-Carboxyfluorescein N-succinimidyl ester | 92557-81-8
Catalog Number | R01-0025 |
Category | NHS Esters |
Molecular Formula | C25H15NO9 |
Molecular Weight | 473.393 |
Catalog Number | Size | Price | Quantity |
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R01-0025 | 500 mg | $299 |
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Product Introduction
6-Carboxyfluorescein N-succinimidyl ester is the amine-reactive succinimidyl ester carboxyfluorescein that is used in the labeling of nucleotides and nucleic acids.
Chemical Information |
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Synonyms | FAM NHS ester, 6-isomer;OSu-FAM; 6-FAM, SE; 6-FAM SE; 6-Carboxyfluorescein-NHS; 6-Carboxyfluorescein N-hydroxysuccinimide ester; (2,5-dioxopyrrolidin-1-yl) 3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate |
Purity | NMR 1H, HPLC-MS (95%) |
IUPAC Name | (2,5-dioxopyrrolidin-1-yl) 3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate |
Canonical SMILES | C1CC(=O)N(C1=O)OC(=O)C2=CC3=C(C=C2)C(=O)OC34C5=C(C=C(C=C5)O)OC6=C4C=CC(=C6)O |
InChI | InChI=1S/C25H15NO9/c27-13-2-5-16-19(10-13)33-20-11-14(28)3-6-17(20)25(16)18-9-12(1-4-15(18)24(32)34-25)23(31)35-26-21(29)7-8-22(26)30/h1-6,9-11,27-28H,7-8H2 |
InChI Key | VDABVNMGKGUPEY-UHFFFAOYSA-N |
Solubility | good in DMF, DMSO |
Appearance | yellow crystalline solid |
- Product Specification
- Application
ε, L⋅mol-1⋅cm-1 | 75000 |
Fluorescence Quantum Yield | 0.9 |
Excitation | 494 |
Emission | 520 |
Storage | 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
6-Carboxyfluorescein N-succinimidyl ester (6-FAM SE) is a fluorescent dye commonly utilized for labeling biomolecules. Here are four key applications of 6-Carboxyfluorescein N-succinimidyl ester:
Fluorescence Microscopy: Widely employed in visualizing proteins, peptides, and other biomolecules, 6-FAM SE serves as a beacon under fluorescence microscopy. Its luminous characteristics enable researchers to trace and scrutinize the whereabouts and interactions of labeled molecules within cells. This pivotal application is indispensable for exploring cellular structures, unraveling molecular dynamics, and dissecting biological processes in real-time.
Flow Cytometry: At the forefront of cell analysis, 6-FAM SE plays a pivotal role in characterizing and sorting cells based on their fluorescence intensity. This dye facilitates the concurrent assessment of various parameters, including cell size, granularity, and the presence of specific biomarkers. Flow cytometry is an invaluable tool for immunophenotyping, cell sorting, and studying diverse cell populations with intricate compositions.
Quantitative PCR (qPCR): Serving as a beacon in quantitative PCR assays, 6-FAM SE acts as a fluorescent reporter dye embedded in probes. By integrating 6-FAM SE into the probes, researchers can monitor the real-time amplification of target DNA sequences through fluorescence detection. This sophisticated technique enables precise quantification of nucleic acids, aiding in gene expression analyses, pathogen identification, and genetic variability assessments.
Protein-Protein Interaction Studies: In the realm of deciphering biological interactions, 6-FAM SE labeling emerges as a potent tool for probing protein-protein interactions. By tagging a protein with 6-FAM SE, researchers can track its engagements with other biomolecules utilizing techniques like fluorescence resonance energy transfer (FRET). This method provides invaluable insights into the intricate dynamics and mechanisms governing biological interactions, shedding light on the interplay within complex biological systems.
Computed Properties | |
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XLogP3 | 2.4 |
Hydrogen Bond Donor Count | 2 |
Hydrogen Bond Acceptor Count | 9 |
Rotatable Bond Count | 3 |
Exact Mass | 473.07468106 g/mol |
Monoisotopic Mass | 473.07468106 g/mol |
Topological Polar Surface Area | 140Ų |
Heavy Atom Count | 35 |
Formal Charge | 0 |
Complexity | 894 |
Isotope Atom Count | 0 |
Defined Atom Stereocenter Count | 0 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Covalently-Bonded Unit Count | 1 |
Compound Is Canonicalized | Yes |
Literatures
PMID | Publication Date | Title | Journal |
---|---|---|---|
9285 | 1976-09-01 | Biosynthesis of stizolobinic acid and stizolobic acid in higher plants. An enzyme system(s) catalyzing the conversion of dihydroxyphenylalanine into stizolobinic acid and stizolobic acid from etiolated seedlings of Stizolobium hassjoo | European journal of biochemistry |
9285 | 1976-09-01 | Biosynthesis of stizolobinic acid and stizolobic acid in higher plants. An enzyme system(s) catalyzing the conversion of dihydroxyphenylalanine into stizolobinic acid and stizolobic acid from etiolated seedlings of Stizolobium hassjoo | European journal of biochemistry |
Patents
Publication Number | Title | Priority Date |
---|---|---|
CN-114533875-A | Application of 2-cyanophenacene compounds in the preparation of drugs for the treatment of drug-resistant tumors | 2022-01-27 |
CN-114099682-A | Use of PI3Kγ inhibitors in the treatment of residual tumors by radiofrequency ablation | 2021-12-07 |
US-11359012-B1 | Specific chimeric antigen receptor cells targeting human CLDN18A2, preparation method and application thereof | 2021-08-27 |
EP-4112640-A1 | Novel single domain antigen binding molecules and their uses | 2021-06-29 |
WO-2023275075-A1 | Novel single domain antigen binding molecules and their uses | 2021-06-29 |
Applications of Fluorescent Probes & Dyes
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