6 TMR Tre
Catalog Number | A21-0012 |
Category | Fluorescent Probes for Imaging Bacteria |
Molecular Formula | C37H43N3O14 |
Molecular Weight | 753.75 |
Catalog Number | Size | Price | Quantity |
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A21-0012 | -- | $-- |
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Product Introduction
6 TMR Tre is a fluorescent trehalose conjugate for imaging bacterial cell envelope. Selectively labels mycobacterial trehalose monomycolate (TMM). Allows real-time visualization of peptidoglycan and monomycolate dynamics at the single-cell level. Suitable for use with confocal and super-resolution microscopy.
Chemical Information |
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Synonyms | 6-[4(3)-[3,6-bis(dimethylamino)xanthylium-9-yl]-3(4)-carboxybenzoyl]amino-6-deoxy-?,?-D-trehalose |
Purity | ≥98% (HPLC) |
IUPAC Name | 2-[3-(dimethylamino)-6-dimethylazaniumylidenexanthen-9-yl]-5-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methylcarbamoyl]benzoate |
Canonical SMILES | CN(C)C1=CC2=C(C=C1)C(=C3C=CC(=[N+](C)C)C=C3O2)C4=C(C=C(C=C4)C(=O)NCC5C(C(C(C(O5)OC6C(C(C(C(O6)CO)O)O)O)O)O)O)C(=O)[O-] |
InChI | InChI=1S/C37H43N3O14/c1-39(2)17-6-9-20-23(12-17)51-24-13-18(40(3)4)7-10-21(24)27(20)19-8-5-16(11-22(19)35(49)50)34(48)38-14-25-28(42)30(44)32(46)36(52-25)54-37-33(47)31(45)29(43)26(15-41)53-37/h5-13,25-26,28-33,36-37,41-47H,14-15H2,1-4H3,(H-,38,48,49,50)/t25-,26-,28-,29-,30+,31+,32-,33-,36-,37-/m1/s1 |
InChI Key | JYUKFHJGZVOYAS-FHUSHBECSA-N |
Solubility | DMSO |
- Product Specification
- Application
Excitation | 532 |
Emission | 580 |
Storage | Store at -20°C |
6 TMR Tre is a highly specialized fluorescent trehalose conjugate that plays a crucial role in the imaging of bacterial cell envelopes, with a specific affinity for mycobacterial trehalose monomycolate (TMM). This innovative compound has been engineered to selectively label TMM, a significant constituent of mycobacterial cell walls that includes complex lipids like mycolic acids intertwined with trehalose. This specificity allows researchers to utilize 6 TMR Tre as a powerful tool in microbiology to delve deeper into the structural complexities of bacterial membranes, thereby enhancing our understanding of bacterial physiology and pathology. Through its application, researchers are afforded the ability to explore the dynamics of bacterial structures with unprecedented clarity and depth.
One of the primary applications of 6 TMR Tre is in real-time visualization of peptidoglycan and monomycolate dynamics at the single-cell level. This function is particularly important because it allows researchers to observe and analyze the real-time changes and interactions within the bacterial cell wall as processes occur. By facilitating this level of observation, 6 TMR Tre aids in the understanding of bacterial growth, division, and the ways in which bacteria interact with their environments. This application is essential for microbiologists who aim to study bacterial life processes in real-time, potentially leading to the discovery of novel therapeutic targets or antibacterial strategies.
Another significant application of 6 TMR Tre is its use in confocal and super-resolution microscopy, which are advanced imaging techniques that provide exceptionally detailed images. The use of 6 TMR Tre in these microscopy methods allows researchers to obtain high-resolution images of mycobacterial cell walls, contributing to a detailed understanding of their structure and function. This is especially valuable in research settings where the precise architecture of bacterial cells must be observed, for instance, in studies investigating the structural integrity and pathology of bacteria under various conditions. High-resolution imaging brought about by 6 TMR Tre thus offers invaluable insights into the microscopic world of mycobacteria.
Beyond visualization and high-resolution imaging, 6 TMR Tre serves a pivotal role in experimental investigations concerning the mechanisms of bacterial resistance and infection. By providing a clear picture of the cell wall dynamics and composition, researchers can better understand how bacteria resist environmental stresses and antibiotics. This application is crucial for developing strategies to combat antibiotic-resistant strains of bacteria by targeting their cell wall synthesis and maintenance processes. Thus, 6 TMR Tre not only aids in fundamental research but also has practical implications in the field of medical microbiology and antibiotic development.
Finally, 6 TMR Tre’s unique properties make it a valuable tool in educational settings, where it can be used to teach students about microbiological techniques and bacterial cellular structures. Its application in classroom and laboratory settings provides students with hands-on experience in advanced microscopy and bacterial labeling, fostering a deeper understanding of microbiological concepts and the importance of cell wall dynamics in bacterial life. By using 6 TMR Tre, educators can bridge the gap between theoretical knowledge and practical microscopy skills, preparing the next generation of microbiologists with the tools and understanding they need to advance in their studies and future careers.
Computed Properties | |
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XLogP3 | -0.8 |
Hydrogen Bond Donor Count | 8 |
Hydrogen Bond Acceptor Count | 15 |
Rotatable Bond Count | 8 |
Exact Mass | 753.27450305 g/mol |
Monoisotopic Mass | 753.27450305 g/mol |
Topological Polar Surface Area | 254Ų |
Heavy Atom Count | 54 |
Formal Charge | 0 |
Complexity | 1480 |
Isotope Atom Count | 0 |
Defined Atom Stereocenter Count | 10 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Covalently-Bonded Unit Count | 1 |
Compound Is Canonicalized | Yes |
Applications of Fluorescent Probes & Dyes
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