Amino-11-ddUTP

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Amino-11-ddUTP

Amino-11-ddUTP

Catalog Number R11-0001
Category Triphosphates
Molecular Formula C18H62Li3N4O32P3
Molecular Weight 960.44
Catalog Number Size Price Quantity
R11-0001 -- $--

Product Introduction

Amino-11-ddUTP is a terminator triphosphate for enzymatic end-labeling of DNA. The nucleotide is incorporated by Taq DNA polymerase, Sequenase, Klenow fragment. Subsequent reaction of amino-terminated DNA with activated esters can be used for the end-labeling of DNA.

Chemical Information

Purity NMR 1H and 31P, HPLC-MS (99+%)
IUPAC Name [[[5-[5-[3-(4-aminobutanoylamino)prop-1-ynyl]-2,4-dioxopyrimidin-1-yl]oxolan-2-yl]methoxy-oxidophosphoryl]oxy-oxidophosphoryl] hydrogen phosphate
Canonical SMILES C1CC(OC1COP(=O)([O-])OP(=O)([O-])OP(=O)(O)[O-])N2C=C(C(=O)NC2=O)C#CCNC(=O)CCCN
InChI InChI=1S/C16H25N4O14P3/c17-7-1-4-13(21)18-8-2-3-11-9-20(16(23)19-15(11)22)14-6-5-12(32-14)10-31-36(27,28)34-37(29,30)33-35(24,25)26/h9,12,14H,1,4-8,10,17H2,(H,18,21)(H,27,28)(H,29,30)(H,19,22,23)(H2,24,25,26)/p-3
InChI Key ROYWJKOFQAFJCX-UHFFFAOYSA-K
Solubility good in water
Appearance colorless solid
  • Product Specification
Storage 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

XLogP3 -7.8
Hydrogen Bond Donor Count 4
Hydrogen Bond Acceptor Count 15
Rotatable Bond Count 13
Exact Mass 587.03453738 g/mol
Monoisotopic Mass 587.03453738 g/mol
Topological Polar Surface Area 282Ų
Heavy Atom Count 37
Formal Charge -3
Complexity 1120
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 2
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes
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