Cyanine5 NHS ester minimal dye

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Cyanine5 NHS ester minimal dye

Cyanine5 NHS ester minimal dye

Catalog Number R01-0020
Category NHS Esters
Molecular Formula C36H42BF4N3O4
Molecular Weight 667.5
Catalog Number Size Price Quantity
R01-0020 -- $--

Product Introduction

Cyanine5 minimal dye for protein labeling, an analog of Cy5® minimal dye. This reagent is specially quantified for the use in 2D proteomics. Each package contains specified amount of NHS ester with quantity variation within 10%.

Chemical Information

Synonyms Cyanine5 NHS ester
Purity NMR 1H, HPLC-MS, functional testing
IUPAC Name (2,5-dioxopyrrolidin-1-yl) 6-[3,3-dimethyl-2-[5-(1,3,3-trimethylindol-1-ium-2-yl)penta-2,4-dienylidene]indol-1-yl]hexanoate;trifluoroborane;fluoride
Canonical SMILES B(F)(F)F.CC1(C2=CC=CC=C2[N+](=C1C=CC=CC=C3C(C4=CC=CC=C4N3CCCCCC(=O)ON5C(=O)CCC5=O)(C)C)C)C.[F-]
InChI InChI=1S/C36H42N3O4.BF3.FH/c1-35(2)26-16-11-13-18-28(26)37(5)30(35)20-8-6-9-21-31-36(3,4)27-17-12-14-19-29(27)38(31)25-15-7-10-22-34(42)43-39-32(40)23-24-33(39)41;2-1(3)4;/h6,8-9,11-14,16-21H,7,10,15,22-25H2,1-5H3;;1H/q+1;;/p-1
InChI Key LWBHPHPQYRCYHI-UHFFFAOYSA-M
Appearance dark blue solid
  • Product Specification
Excitation 645
Emission 660
Storage 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 0
Hydrogen Bond Acceptor Count 9
Rotatable Bond Count 11
Exact Mass 667.3204496 g/mol
Monoisotopic Mass 667.3204496 g/mol
Topological Polar Surface Area 69.9Ų
Heavy Atom Count 48
Formal Charge 0
Complexity 1200
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 3
Covalently-Bonded Unit Count 3
Compound Is Canonicalized Yes
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